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Cluster: CGMR022678_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_10958 k141_10958_19 16045 16746 - 3.A.1.122.4
pfam k141_10958 k141_10958_20 16759 17820 - FtsX
TF k141_10958 k141_10958_21 18061 18864 - HTH_AraC
CAZyme k141_10958 k141_10958_22 18955 21126 + GH36
CAZyme k141_10958 k141_10958_23 21168 22796 - GH13_31
TC k141_10958 k141_10958_24 22789 24741 - 4.A.1.2.12
NULL(UNKNOWN) k141_10958 k141_10958_25 24816 24983 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_10958 k141_10958_26 25043 26542 + GH32
TF k141_10958 k141_10958_27 26559 27542 + LacI
pfam k141_10958 k141_10958_28 27600 28775 - malic | Malic_M
TC k141_10958 k141_10958_29 28982 30334 - 2.A.24.2.1
Gene ID: k141_10958_19
Type: TC
Location: 16045 - 16746 (-)
Gene ID: k141_10958_20
Type: pfam
Location: 16759 - 17820 (-)
Gene ID: k141_10958_21
Type: TF
Location: 18061 - 18864 (-)
Gene ID: k141_10958_22
Type: CAZyme
Location: 18955 - 21126 (+)
Gene ID: k141_10958_23
Type: CAZyme
Location: 21168 - 22796 (-)
Gene ID: k141_10958_24
Type: TC
Location: 22789 - 24741 (-)
Gene ID: k141_10958_25
Type:
Location: 24816 - 24983 (-)
Gene ID: k141_10958_26
Type: CAZyme
Location: 25043 - 26542 (+)
Gene ID: k141_10958_27
Type: TF
Location: 26559 - 27542 (+)
Gene ID: k141_10958_28
Type: pfam
Location: 27600 - 28775 (-)
Gene ID: k141_10958_29
Type: TC
Location: 28982 - 30334 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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