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Cluster: CGMR022678_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9142 k141_9142_18 13225 13878 + 1.A.8.13.3
pfam k141_9142 k141_9142_19 13987 14415 - DUF6442
TF k141_9142 k141_9142_20 14415 14615 - HTH_3
TC k141_9142 k141_9142_21 14758 16092 - 2.A.3.1.22
pfam k141_9142 k141_9142_22 16549 16791 + Transgly_assoc
pfam k141_9142 k141_9142_23 16830 17771 - NAD_Gly3P_dh_N | ApbA | NAD_binding_2 | ApbA_C
CAZyme k141_9142 k141_9142_24 18186 19235 + GH170
STP k141_9142 k141_9142_25 19238 20128 + SIS
TC k141_9142 k141_9142_26 20141 22093 + 4.A.1.2.11
TF k141_9142 k141_9142_27 22243 23094 - HTH_6
TC k141_9142 k141_9142_28 23238 23873 + 9.B.27.2.3
Gene ID: k141_9142_18
Type: TC
Location: 13225 - 13878 (+)
Gene ID: k141_9142_19
Type: pfam
Location: 13987 - 14415 (-)
Gene ID: k141_9142_20
Type: TF
Location: 14415 - 14615 (-)
Gene ID: k141_9142_21
Type: TC
Location: 14758 - 16092 (-)
Gene ID: k141_9142_22
Type: pfam
Location: 16549 - 16791 (+)
Gene ID: k141_9142_23
Type: pfam
Location: 16830 - 17771 (-)
Gene ID: k141_9142_24
Type: CAZyme
Location: 18186 - 19235 (+)
Gene ID: k141_9142_25
Type: STP
Location: 19238 - 20128 (+)
Gene ID: k141_9142_26
Type: TC
Location: 20141 - 22093 (+)
Gene ID: k141_9142_27
Type: TF
Location: 22243 - 23094 (-)
Gene ID: k141_9142_28
Type: TC
Location: 23238 - 23873 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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