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Cluster: CGMR022581_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_40427 k141_40427_2 1118 3592 - 8.A.3.1.2
pfam k141_40427 k141_40427_3 3595 4404 - Poly_export | SLBB | SLBB_2
CAZyme k141_40427 k141_40427_4 4574 5851 + GH13
pfam k141_40427 k141_40427_5 5922 7508 + CN_hydrolase | NAD_synthase
pfam k141_40427 k141_40427_6 7498 7920 + RseC_MucC
TC k141_40427 k141_40427_7 7920 8771 + 3.D.6.1.2
TC k141_40427 k141_40427_8 8773 10116 + 3.D.6.1.2
TC k141_40427 k141_40427_9 10129 11097 + 3.D.6.1.2
TC k141_40427 k141_40427_10 11107 11733 + 3.D.6.1.4
TC k141_40427 k141_40427_11 11726 12316 + 3.D.6.1.2
TC k141_40427 k141_40427_12 12316 12888 + 3.D.6.1.2
Gene ID: k141_40427_2
Type: TC
Location: 1118 - 3592 (-)
Gene ID: k141_40427_3
Type: pfam
Location: 3595 - 4404 (-)
Gene ID: k141_40427_4
Type: CAZyme
Location: 4574 - 5851 (+)
Gene ID: k141_40427_5
Type: pfam
Location: 5922 - 7508 (+)
Gene ID: k141_40427_6
Type: pfam
Location: 7498 - 7920 (+)
Gene ID: k141_40427_7
Type: TC
Location: 7920 - 8771 (+)
Gene ID: k141_40427_8
Type: TC
Location: 8773 - 10116 (+)
Gene ID: k141_40427_9
Type: TC
Location: 10129 - 11097 (+)
Gene ID: k141_40427_10
Type: TC
Location: 11107 - 11733 (+)
Gene ID: k141_40427_11
Type: TC
Location: 11726 - 12316 (+)
Gene ID: k141_40427_12
Type: TC
Location: 12316 - 12888 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_40427_12 omnivore > vegan 1.61971 0.01560
k141_40427_12 vegetarian > vegan 1.61197 0.00566

🧭 Explore Read Mapping of CGC

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