Cluster: CGMR022581_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR022581
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_77878 | k141_77878_6 | 3143 | 4627 | - | 1.B.42.1.13 |
| TC | k141_77878 | k141_77878_7 | 4627 | 5457 | - | 3.A.1.15.7 |
| pfam | k141_77878 | k141_77878_8 | 5547 | 6842 | + | UPF0004 | Radical_SAM |
| NULL(UNKNOWN) | k141_77878 | k141_77878_9 | 6891 | 7700 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_77878 | k141_77878_10 | 7702 | 9147 | + | 2.A.38.1.1 |
| NULL(UNKNOWN) | k141_77878 | k141_77878_11 | 9147 | 10634 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_77878 | k141_77878_12 | 10654 | 11115 | + | NfeD |
| CAZyme | k141_77878 | k141_77878_13 | 11130 | 13748 | + | GH31_15 |
Gene ID: k141_77878_6
Type: TC
Location: 3143 - 4627 (-)
Type: TC
Location: 3143 - 4627 (-)
Gene ID: k141_77878_7
Type: TC
Location: 4627 - 5457 (-)
Type: TC
Location: 4627 - 5457 (-)
Gene ID: k141_77878_8
Type: pfam
Location: 5547 - 6842 (+)
Type: pfam
Location: 5547 - 6842 (+)
Gene ID: k141_77878_9
Type:
Location: 6891 - 7700 (+)
Type:
Location: 6891 - 7700 (+)
Gene ID: k141_77878_10
Type: TC
Location: 7702 - 9147 (+)
Type: TC
Location: 7702 - 9147 (+)
Gene ID: k141_77878_11
Type:
Location: 9147 - 10634 (+)
Type:
Location: 9147 - 10634 (+)
Gene ID: k141_77878_12
Type: pfam
Location: 10654 - 11115 (+)
Type: pfam
Location: 10654 - 11115 (+)
Gene ID: k141_77878_13
Type: CAZyme
Location: 11130 - 13748 (+)
Type: CAZyme
Location: 11130 - 13748 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp017938765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.