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Cluster: CGMR022526_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_315139 k141_315139_11 11339 13393 + 3.A.16.1.1
pfam k141_315139 k141_315139_12 13512 14381 + CTP_transf_1
NULL(UNKNOWN) k141_315139 k141_315139_13 14563 14709 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_315139 k141_315139_14 14807 15976 - GT19
pfam k141_315139 k141_315139_15 15988 16764 - SurE
TC k141_315139 k141_315139_16 16941 17720 + 8.A.3.2.3
TF k141_315139 k141_315139_17 17771 18667 + HTH_3
pfam k141_315139 k141_315139_18 18668 19420 + DUF5683
CAZyme k141_315139 k141_315139_19 19534 20913 + GH23
Gene ID: k141_315139_11
Type: TC
Location: 11339 - 13393 (+)
Gene ID: k141_315139_12
Type: pfam
Location: 13512 - 14381 (+)
Gene ID: k141_315139_13
Type:
Location: 14563 - 14709 (+)
Gene ID: k141_315139_14
Type: CAZyme
Location: 14807 - 15976 (-)
Gene ID: k141_315139_15
Type: pfam
Location: 15988 - 16764 (-)
Gene ID: k141_315139_16
Type: TC
Location: 16941 - 17720 (+)
Gene ID: k141_315139_17
Type: TF
Location: 17771 - 18667 (+)
Gene ID: k141_315139_18
Type: pfam
Location: 18668 - 19420 (+)
Gene ID: k141_315139_19
Type: CAZyme
Location: 19534 - 20913 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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