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Cluster: CGMR022526_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_48161 k141_48161_13 13826 17164 + 3.A.5.1.1
pfam k141_48161 k141_48161_14 17362 17769 - DUF1232
NULL(UNKNOWN) k141_48161 k141_48161_15 17776 18225 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_48161 k141_48161_16 18959 20404 + 2.A.102.4.10
TF k141_48161 k141_48161_17 20630 24580 + HTH_AraC
NULL(UNKNOWN) k141_48161 k141_48161_18 24517 24654 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_48161 k141_48161_19 25366 27306 + GH93
CAZyme k141_48161 k141_48161_20 27316 29352 + GH182
CAZyme k141_48161 k141_48161_21 29457 31526 + GH43_3
Gene ID: k141_48161_13
Type: TC
Location: 13826 - 17164 (+)
Gene ID: k141_48161_14
Type: pfam
Location: 17362 - 17769 (-)
Gene ID: k141_48161_15
Type:
Location: 17776 - 18225 (-)
Gene ID: k141_48161_16
Type: TC
Location: 18959 - 20404 (+)
Gene ID: k141_48161_17
Type: TF
Location: 20630 - 24580 (+)
Gene ID: k141_48161_18
Type:
Location: 24517 - 24654 (-)
Gene ID: k141_48161_19
Type: CAZyme
Location: 25366 - 27306 (+)
Gene ID: k141_48161_20
Type: CAZyme
Location: 27316 - 29352 (+)
Gene ID: k141_48161_21
Type: CAZyme
Location: 29457 - 31526 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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