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Cluster: CGMR021903_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2644 k141_2644_10 10606 11940 + 9.B.18.1.2
CAZyme k141_2644 k141_2644_11 11942 13156 + GT4
TC k141_2644 k141_2644_12 13153 14175 + 9.B.18.2.1
pfam k141_2644 k141_2644_13 14177 15349 + Epimerase | Polysacc_synt_C
pfam k141_2644 k141_2644_14 15362 16531 + Epimerase_2 | Glyphos_transf
CAZyme k141_2644 k141_2644_15 16531 17646 + GT4
TC k141_2644 k141_2644_16 17639 19003 + 9.B.67.3.6
CAZyme k141_2644 k141_2644_17 18987 20030 + GT4
CAZyme k141_2644 k141_2644_18 20047 20910 + GT8
Gene ID: k141_2644_10
Type: TC
Location: 10606 - 11940 (+)
Gene ID: k141_2644_11
Type: CAZyme
Location: 11942 - 13156 (+)
Gene ID: k141_2644_12
Type: TC
Location: 13153 - 14175 (+)
Gene ID: k141_2644_13
Type: pfam
Location: 14177 - 15349 (+)
Gene ID: k141_2644_14
Type: pfam
Location: 15362 - 16531 (+)
Gene ID: k141_2644_15
Type: CAZyme
Location: 16531 - 17646 (+)
Gene ID: k141_2644_16
Type: TC
Location: 17639 - 19003 (+)
Gene ID: k141_2644_17
Type: CAZyme
Location: 18987 - 20030 (+)
Gene ID: k141_2644_18
Type: CAZyme
Location: 20047 - 20910 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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