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Cluster: CGMR021903_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_173 k141_173_19 23647 25080 - 2.A.2.3.2
CAZyme k141_173 k141_173_20 25123 26313 - GH88
sulfatase k141_173 k141_173_21 26334 27743 - S1_27
CAZyme k141_173 k141_173_22 27971 30391 - PL8
pfam k141_173 k141_173_23 30415 34671 - Autotransporter
TC k141_173 k141_173_24 35227 36792 - 3.A.1.1.10
pfam k141_173 k141_173_25 36979 37815 - KduI
sulfatase k141_173 k141_173_26 37875 38657 - S1_4
CAZyme k141_173 k141_173_27 38860 40824 - PL8
CAZyme k141_173 k141_173_28 41069 43060 - PL8
Gene ID: k141_173_19
Type: TC
Location: 23647 - 25080 (-)
Gene ID: k141_173_20
Type: CAZyme
Location: 25123 - 26313 (-)
Gene ID: k141_173_21
Type: sulfatase
Location: 26334 - 27743 (-)
Gene ID: k141_173_22
Type: CAZyme
Location: 27971 - 30391 (-)
Gene ID: k141_173_23
Type: pfam
Location: 30415 - 34671 (-)
Gene ID: k141_173_24
Type: TC
Location: 35227 - 36792 (-)
Gene ID: k141_173_25
Type: pfam
Location: 36979 - 37815 (-)
Gene ID: k141_173_26
Type: sulfatase
Location: 37875 - 38657 (-)
Gene ID: k141_173_27
Type: CAZyme
Location: 38860 - 40824 (-)
Gene ID: k141_173_28
Type: CAZyme
Location: 41069 - 43060 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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