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Cluster: CGMR021547_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_54937 k141_54937_38 41028 43103 - GH3
pfam k141_54937 k141_54937_39 43346 44425 + Metallophos
TC k141_54937 k141_54937_40 44452 45816 + 2.A.66.1.33
TF k141_54937 k141_54937_41 46103 47107 - LacI
TC k141_54937 k141_54937_42 47369 48349 + 3.A.1.1.10
TC k141_54937 k141_54937_43 48367 49299 + 3.A.1.1.29
pfam k141_54937 k141_54937_44 49367 50782 + DUF3502
CAZyme k141_54937 k141_54937_45 50964 51950 + GH130_2
CAZyme k141_54937 k141_54937_46 51993 55094 + GH38
CAZyme k141_54937 k141_54937_47 55095 56930 + GH20
Gene ID: k141_54937_38
Type: CAZyme
Location: 41028 - 43103 (-)
Gene ID: k141_54937_39
Type: pfam
Location: 43346 - 44425 (+)
Gene ID: k141_54937_40
Type: TC
Location: 44452 - 45816 (+)
Gene ID: k141_54937_41
Type: TF
Location: 46103 - 47107 (-)
Gene ID: k141_54937_42
Type: TC
Location: 47369 - 48349 (+)
Gene ID: k141_54937_43
Type: TC
Location: 48367 - 49299 (+)
Gene ID: k141_54937_44
Type: pfam
Location: 49367 - 50782 (+)
Gene ID: k141_54937_45
Type: CAZyme
Location: 50964 - 51950 (+)
Gene ID: k141_54937_46
Type: CAZyme
Location: 51993 - 55094 (+)
Gene ID: k141_54937_47
Type: CAZyme
Location: 55095 - 56930 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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