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Cluster: CGMR021547_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_110722 k141_110722_2 1936 2835 - 3.A.1.1.29
TC k141_110722 k141_110722_3 2836 3792 - 3.A.1.1.10
TF k141_110722 k141_110722_4 3978 5012 + HTH_AraC | HTH_AraC
TC k141_110722 k141_110722_5 4976 6763 - 9.B.33.1.1
CAZyme k141_110722 k141_110722_6 6997 8505 + GH51_1
CAZyme k141_110722 k141_110722_7 8532 9458 + GH43_32
CAZyme k141_110722 k141_110722_8 9487 11325 + GH127
STP k141_110722 k141_110722_9 11528 12001 + Sigma70_r2 | Sigma70_r4_2
NULL(UNKNOWN) k141_110722 k141_110722_10 11998 13335 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_110722 k141_110722_11 13744 16392 + CBM67 | GH78
CAZyme k141_110722 k141_110722_12 16492 17913 + GH29
Gene ID: k141_110722_2
Type: TC
Location: 1936 - 2835 (-)
Gene ID: k141_110722_3
Type: TC
Location: 2836 - 3792 (-)
Gene ID: k141_110722_4
Type: TF
Location: 3978 - 5012 (+)
Gene ID: k141_110722_5
Type: TC
Location: 4976 - 6763 (-)
Gene ID: k141_110722_6
Type: CAZyme
Location: 6997 - 8505 (+)
Gene ID: k141_110722_7
Type: CAZyme
Location: 8532 - 9458 (+)
Gene ID: k141_110722_8
Type: CAZyme
Location: 9487 - 11325 (+)
Gene ID: k141_110722_9
Type: STP
Location: 11528 - 12001 (+)
Gene ID: k141_110722_10
Type:
Location: 11998 - 13335 (+)
Gene ID: k141_110722_11
Type: CAZyme
Location: 13744 - 16392 (+)
Gene ID: k141_110722_12
Type: CAZyme
Location: 16492 - 17913 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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