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Cluster: CGMR021547_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_250895 k141_250895_8 7078 9258 + GH36
pfam k141_250895 k141_250895_9 9427 9879 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9 | Acetyltransf_10
pfam k141_250895 k141_250895_10 9946 10467 - DUF6886
TC k141_250895 k141_250895_11 11701 12549 + 3.A.1.26.7
TC k141_250895 k141_250895_12 12534 13400 + 3.A.1.26.7
TC k141_250895 k141_250895_13 13390 14193 + 3.A.1.26.7
pfam k141_250895 k141_250895_14 14190 14972 + PseudoU_synth_1 | PseudoU_synth_1
pfam k141_250895 k141_250895_15 15036 15359 + SpoIIID
TC k141_250895 k141_250895_16 15434 16450 + 1.A.33.1.5
pfam k141_250895 k141_250895_17 16610 17038 + Hydrolase_2
TC k141_250895 k141_250895_18 17069 18877 + 3.A.1.120.6
Gene ID: k141_250895_8
Type: CAZyme
Location: 7078 - 9258 (+)
Gene ID: k141_250895_9
Type: pfam
Location: 9427 - 9879 (-)
Gene ID: k141_250895_10
Type: pfam
Location: 9946 - 10467 (-)
Gene ID: k141_250895_11
Type: TC
Location: 11701 - 12549 (+)
Gene ID: k141_250895_12
Type: TC
Location: 12534 - 13400 (+)
Gene ID: k141_250895_13
Type: TC
Location: 13390 - 14193 (+)
Gene ID: k141_250895_14
Type: pfam
Location: 14190 - 14972 (+)
Gene ID: k141_250895_15
Type: pfam
Location: 15036 - 15359 (+)
Gene ID: k141_250895_16
Type: TC
Location: 15434 - 16450 (+)
Gene ID: k141_250895_17
Type: pfam
Location: 16610 - 17038 (+)
Gene ID: k141_250895_18
Type: TC
Location: 17069 - 18877 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_250895_18 vegetarian > vegan 2.05901 0.00247

🧭 Explore Read Mapping of CGC

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