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Cluster: CGMR021547_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_260126 k141_260126_21 25884 27683 - GH20
CAZyme k141_260126 k141_260126_22 27690 30191 - GH2
STP k141_260126 k141_260126_23 30259 31716 - SBP_bac_1
TC k141_260126 k141_260126_24 31774 32652 - 3.A.1.1.29
pfam k141_260126 k141_260126_25 32668 33603 - BPD_transp_1
CAZyme k141_260126 k141_260126_26 33728 35059 - GH125
TF k141_260126 k141_260126_27 35110 36255 - GntR
TF k141_260126 k141_260126_28 36520 37557 + LacI
TC k141_260126 k141_260126_29 37872 38828 + 3.A.1.1.10
TC k141_260126 k141_260126_30 38863 39798 + 3.A.1.1.29
STP k141_260126 k141_260126_31 39859 41388 + SBP_bac_1
CAZyme k141_260126 k141_260126_32 41507 43810 + GH2
Gene ID: k141_260126_21
Type: CAZyme
Location: 25884 - 27683 (-)
Gene ID: k141_260126_22
Type: CAZyme
Location: 27690 - 30191 (-)
Gene ID: k141_260126_23
Type: STP
Location: 30259 - 31716 (-)
Gene ID: k141_260126_24
Type: TC
Location: 31774 - 32652 (-)
Gene ID: k141_260126_25
Type: pfam
Location: 32668 - 33603 (-)
Gene ID: k141_260126_26
Type: CAZyme
Location: 33728 - 35059 (-)
Gene ID: k141_260126_27
Type: TF
Location: 35110 - 36255 (-)
Gene ID: k141_260126_28
Type: TF
Location: 36520 - 37557 (+)
Gene ID: k141_260126_29
Type: TC
Location: 37872 - 38828 (+)
Gene ID: k141_260126_30
Type: TC
Location: 38863 - 39798 (+)
Gene ID: k141_260126_31
Type: STP
Location: 39859 - 41388 (+)
Gene ID: k141_260126_32
Type: CAZyme
Location: 41507 - 43810 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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