dbCAN Logo

Cluster: CGMR021547_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_112067 k141_112067_1 1 1236 - 1.A.33.1.4
pfam k141_112067 k141_112067_2 1328 1951 - GrpE
TF k141_112067 k141_112067_3 1944 2975 - 0043758
CAZyme k141_112067 k141_112067_4 3249 5054 + GH154
CAZyme k141_112067 k141_112067_5 5038 6147 + GH88
Gene ID: k141_112067_1
Type: TC
Location: 1 - 1236 (-)
Gene ID: k141_112067_2
Type: pfam
Location: 1328 - 1951 (-)
Gene ID: k141_112067_3
Type: TF
Location: 1944 - 2975 (-)
Gene ID: k141_112067_4
Type: CAZyme
Location: 3249 - 5054 (+)
Gene ID: k141_112067_5
Type: CAZyme
Location: 5038 - 6147 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_112067_2 vegetarian > vegan 2.90456 0.00247

🧭 Explore Read Mapping of CGC

← Back to Cluster List