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Cluster: CGMR021546_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_33819 k141_33819_3 1278 2012 - 3.A.1.105.12
TF k141_33819 k141_33819_4 2025 2456 - HTH_3 | SpoVT_AbrB
STP k141_33819 k141_33819_5 2720 6220 - Fer4 | Fer4 | Pyr_redox_2
TC k141_33819 k141_33819_6 6239 7987 - 3.D.1.5.1
TC k141_33819 k141_33819_7 8003 8515 - 3.D.1.5.1
pfam k141_33819 k141_33819_8 9153 10034 - EamA | EamA
pfam k141_33819 k141_33819_9 10054 11121 - DNA_pol3_delta | DNA_pol3_delta_C
TC k141_33819 k141_33819_10 11130 13418 - 3.A.11.1.3
CAZyme k141_33819 k141_33819_11 13635 16511 + GT51
Gene ID: k141_33819_3
Type: TC
Location: 1278 - 2012 (-)
Gene ID: k141_33819_4
Type: TF
Location: 2025 - 2456 (-)
Gene ID: k141_33819_5
Type: STP
Location: 2720 - 6220 (-)
Gene ID: k141_33819_6
Type: TC
Location: 6239 - 7987 (-)
Gene ID: k141_33819_7
Type: TC
Location: 8003 - 8515 (-)
Gene ID: k141_33819_8
Type: pfam
Location: 9153 - 10034 (-)
Gene ID: k141_33819_9
Type: pfam
Location: 10054 - 11121 (-)
Gene ID: k141_33819_10
Type: TC
Location: 11130 - 13418 (-)
Gene ID: k141_33819_11
Type: CAZyme
Location: 13635 - 16511 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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