Cluster: CGMR021527_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR021527
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1162510 | k141_1162510_20 | 24855 | 27317 | + | GT51 |
| pfam | k141_1162510 | k141_1162510_21 | 27349 | 28422 | - | RF-1 | PCRF |
| pfam | k141_1162510 | k141_1162510_22 | 28512 | 29420 | - | HTH_25 | RodZ_C |
| TC | k141_1162510 | k141_1162510_23 | 29479 | 31743 | - | 8.A.7.1.1 |
Gene ID: k141_1162510_20
Type: CAZyme
Location: 24855 - 27317 (+)
Type: CAZyme
Location: 24855 - 27317 (+)
Gene ID: k141_1162510_21
Type: pfam
Location: 27349 - 28422 (-)
Type: pfam
Location: 27349 - 28422 (-)
Gene ID: k141_1162510_22
Type: pfam
Location: 28512 - 29420 (-)
Type: pfam
Location: 28512 - 29420 (-)
Gene ID: k141_1162510_23
Type: TC
Location: 29479 - 31743 (-)
Type: TC
Location: 29479 - 31743 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.