Cluster: CGMR021527_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR021527
- CGC Family ID: CGCFAM_02650
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_412810 | k141_412810_16 | 11928 | 12704 | + | 1.A.30.1.3 |
| TC | k141_412810 | k141_412810_17 | 12707 | 13384 | + | 1.A.30.1.4 |
| pfam | k141_412810 | k141_412810_18 | 13488 | 13925 | + | PMSR |
| CAZyme | k141_412810 | k141_412810_19 | 13979 | 15133 | + | CE9 |
Gene ID: k141_412810_16
Type: TC
Location: 11928 - 12704 (+)
Type: TC
Location: 11928 - 12704 (+)
Gene ID: k141_412810_17
Type: TC
Location: 12707 - 13384 (+)
Type: TC
Location: 12707 - 13384 (+)
Gene ID: k141_412810_18
Type: pfam
Location: 13488 - 13925 (+)
Type: pfam
Location: 13488 - 13925 (+)
Gene ID: k141_412810_19
Type: CAZyme
Location: 13979 - 15133 (+)
Type: CAZyme
Location: 13979 - 15133 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.