Cluster: CGMR021527_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR021527
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_518872 | k141_518872_15 | 14207 | 15370 | + | 2.A.6.2.4 |
| TC | k141_518872 | k141_518872_16 | 15374 | 18472 | + | 2.A.6.2.16 |
| pfam | k141_518872 | k141_518872_17 | 18545 | 19846 | - | tRNA-synt_2b | HGTP_anticodon | tRNA-synt_His |
| CAZyme | k141_518872 | k141_518872_18 | 20006 | 20899 | + | GT32 |
| pfam | k141_518872 | k141_518872_19 | 20994 | 21989 | + | Semialdhyde_dh | Semialdhyde_dhC |
| TC | k141_518872 | k141_518872_20 | 22002 | 24419 | + | 1.A.23.1.1 |
| pfam | k141_518872 | k141_518872_21 | 24409 | 25725 | + | Mur_ligase_M |
| CAZyme | k141_518872 | k141_518872_22 | 25729 | 26748 | + | GT2 |
Gene ID: k141_518872_15
Type: TC
Location: 14207 - 15370 (+)
Type: TC
Location: 14207 - 15370 (+)
Gene ID: k141_518872_16
Type: TC
Location: 15374 - 18472 (+)
Type: TC
Location: 15374 - 18472 (+)
Gene ID: k141_518872_17
Type: pfam
Location: 18545 - 19846 (-)
Type: pfam
Location: 18545 - 19846 (-)
Gene ID: k141_518872_18
Type: CAZyme
Location: 20006 - 20899 (+)
Type: CAZyme
Location: 20006 - 20899 (+)
Gene ID: k141_518872_19
Type: pfam
Location: 20994 - 21989 (+)
Type: pfam
Location: 20994 - 21989 (+)
Gene ID: k141_518872_20
Type: TC
Location: 22002 - 24419 (+)
Type: TC
Location: 22002 - 24419 (+)
Gene ID: k141_518872_21
Type: pfam
Location: 24409 - 25725 (+)
Type: pfam
Location: 24409 - 25725 (+)
Gene ID: k141_518872_22
Type: CAZyme
Location: 25729 - 26748 (+)
Type: CAZyme
Location: 25729 - 26748 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.