Cluster: CGMR021527_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR021527
- CGC Family ID: CGCFAM_02305
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_633425 | k141_633425_17 | 18355 | 20946 | + | 3.A.9.1.2 |
| pfam | k141_633425 | k141_633425_18 | 21218 | 22045 | + | Hexapep | Hexapep | Acetyltransf_11 |
| pfam | k141_633425 | k141_633425_19 | 22048 | 22890 | + | LpxI_C | LpxI_N |
| CAZyme | k141_633425 | k141_633425_20 | 22874 | 24052 | + | GT19 |
Gene ID: k141_633425_17
Type: TC
Location: 18355 - 20946 (+)
Type: TC
Location: 18355 - 20946 (+)
Gene ID: k141_633425_18
Type: pfam
Location: 21218 - 22045 (+)
Type: pfam
Location: 21218 - 22045 (+)
Gene ID: k141_633425_19
Type: pfam
Location: 22048 - 22890 (+)
Type: pfam
Location: 22048 - 22890 (+)
Gene ID: k141_633425_20
Type: CAZyme
Location: 22874 - 24052 (+)
Type: CAZyme
Location: 22874 - 24052 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.