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Cluster: CGMR021028_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1177 k141_1177_17 16295 17080 + GT2
CAZyme k141_1177 k141_1177_18 17077 18174 + GT4
CAZyme k141_1177 k141_1177_19 18164 19312 + GT4
TC k141_1177 k141_1177_20 19312 19917 + 9.B.18.1.2
pfam k141_1177 k141_1177_21 19919 20509 + Hexapep | Hexapep | Hexapep_2 | PglD_N
STP k141_1177 k141_1177_22 20514 21653 + Aminotran_1_2
TC k141_1177 k141_1177_23 21672 23051 + 9.B.18.2.1
TC k141_1177 k141_1177_24 23006 23626 + 9.B.18.2.1
pfam k141_1177 k141_1177_25 23689 25011 - OEP | OEP
TC k141_1177 k141_1177_26 25123 28158 - 2.A.6.2.33
TC k141_1177 k141_1177_27 28226 29326 - 2.A.6.2.28
pfam k141_1177 k141_1177_28 29713 30921 + Hexokinase_1 | Hexokinase_2 | Hexokinase_2
peptidase k141_1177 k141_1177_29 31063 32067 + U32.UPW
TC k141_1177 k141_1177_30 32154 33737 + 3.D.10.1.3
Gene ID: k141_1177_17
Type: CAZyme
Location: 16295 - 17080 (+)
Gene ID: k141_1177_18
Type: CAZyme
Location: 17077 - 18174 (+)
Gene ID: k141_1177_19
Type: CAZyme
Location: 18164 - 19312 (+)
Gene ID: k141_1177_20
Type: TC
Location: 19312 - 19917 (+)
Gene ID: k141_1177_21
Type: pfam
Location: 19919 - 20509 (+)
Gene ID: k141_1177_22
Type: STP
Location: 20514 - 21653 (+)
Gene ID: k141_1177_23
Type: TC
Location: 21672 - 23051 (+)
Gene ID: k141_1177_24
Type: TC
Location: 23006 - 23626 (+)
Gene ID: k141_1177_25
Type: pfam
Location: 23689 - 25011 (-)
Gene ID: k141_1177_26
Type: TC
Location: 25123 - 28158 (-)
Gene ID: k141_1177_27
Type: TC
Location: 28226 - 29326 (-)
Gene ID: k141_1177_28
Type: pfam
Location: 29713 - 30921 (+)
Gene ID: k141_1177_29
Type: peptidase
Location: 31063 - 32067 (+)
Gene ID: k141_1177_30
Type: TC
Location: 32154 - 33737 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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