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Cluster: CGMR021028_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_27595 k141_27595_28 51917 53914 - GH97
CAZyme k141_27595 k141_27595_29 54059 54763 - GH109
CAZyme k141_27595 k141_27595_30 54812 55447 - GH109
STP k141_27595 k141_27595_31 55639 56217 + Sigma70_r2 | Sigma70_r4_2
STP k141_27595 k141_27595_32 56279 57262 + FecR
TC k141_27595 k141_27595_33 57484 60870 + 1.B.14.6.1
TC k141_27595 k141_27595_34 60883 62418 + 8.A.46.1.3
CAZyme k141_27595 k141_27595_35 62534 64693 + GH92
Gene ID: k141_27595_28
Type: CAZyme
Location: 51917 - 53914 (-)
Gene ID: k141_27595_29
Type: CAZyme
Location: 54059 - 54763 (-)
Gene ID: k141_27595_30
Type: CAZyme
Location: 54812 - 55447 (-)
Gene ID: k141_27595_31
Type: STP
Location: 55639 - 56217 (+)
Gene ID: k141_27595_32
Type: STP
Location: 56279 - 57262 (+)
Gene ID: k141_27595_33
Type: TC
Location: 57484 - 60870 (+)
Gene ID: k141_27595_34
Type: TC
Location: 60883 - 62418 (+)
Gene ID: k141_27595_35
Type: CAZyme
Location: 62534 - 64693 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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