Cluster: CGMR021028_CGC34
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 8
- Substrate: beta-mannan
- Genome ID: CGMR021028
- CGC Family ID: CGCFAM_00722
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_64463 | k141_64463_17 | 19784 | 21673 | + | GH5_10 |
| CAZyme | k141_64463 | k141_64463_18 | 21832 | 24063 | + | GH3 |
| CAZyme | k141_64463 | k141_64463_19 | 24074 | 26659 | + | GH2 |
| peptidase | k141_64463 | k141_64463_20 | 26726 | 27529 | - | S09.UPW |
| CAZyme | k141_64463 | k141_64463_21 | 27620 | 28804 | - | GH26 |
| CAZyme | k141_64463 | k141_64463_22 | 28816 | 30300 | - | GH173 |
| CAZyme | k141_64463 | k141_64463_23 | 30313 | 31782 | - | GH173 |
| NULL(UNKNOWN) | k141_64463 | k141_64463_24 | 31833 | 32795 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_64463 | k141_64463_25 | 32811 | 34322 | - | SusD_RagB | SusD-like_3 |
| TC | k141_64463 | k141_64463_26 | 34361 | 37501 | - | 1.B.14.6.1 |
| CAZyme | k141_64463 | k141_64463_27 | 37595 | 38611 | - | GH130_5 |
| TC | k141_64463 | k141_64463_28 | 38650 | 40227 | - | 2.A.21.3.19 |
| TF | k141_64463 | k141_64463_29 | 40385 | 41251 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_64463 | k141_64463_30 | 41352 | 42830 | + | GH30_3 |
Gene ID: k141_64463_17
Type: CAZyme
Location: 19784 - 21673 (+)
Type: CAZyme
Location: 19784 - 21673 (+)
Gene ID: k141_64463_18
Type: CAZyme
Location: 21832 - 24063 (+)
Type: CAZyme
Location: 21832 - 24063 (+)
Gene ID: k141_64463_19
Type: CAZyme
Location: 24074 - 26659 (+)
Type: CAZyme
Location: 24074 - 26659 (+)
Gene ID: k141_64463_20
Type: peptidase
Location: 26726 - 27529 (-)
Type: peptidase
Location: 26726 - 27529 (-)
Gene ID: k141_64463_21
Type: CAZyme
Location: 27620 - 28804 (-)
Type: CAZyme
Location: 27620 - 28804 (-)
Gene ID: k141_64463_22
Type: CAZyme
Location: 28816 - 30300 (-)
Type: CAZyme
Location: 28816 - 30300 (-)
Gene ID: k141_64463_23
Type: CAZyme
Location: 30313 - 31782 (-)
Type: CAZyme
Location: 30313 - 31782 (-)
Gene ID: k141_64463_24
Type:
Location: 31833 - 32795 (-)
Type:
Location: 31833 - 32795 (-)
Gene ID: k141_64463_25
Type: pfam
Location: 32811 - 34322 (-)
Type: pfam
Location: 32811 - 34322 (-)
Gene ID: k141_64463_26
Type: TC
Location: 34361 - 37501 (-)
Type: TC
Location: 34361 - 37501 (-)
Gene ID: k141_64463_27
Type: CAZyme
Location: 37595 - 38611 (-)
Type: CAZyme
Location: 37595 - 38611 (-)
Gene ID: k141_64463_28
Type: TC
Location: 38650 - 40227 (-)
Type: TC
Location: 38650 - 40227 (-)
Gene ID: k141_64463_29
Type: TF
Location: 40385 - 41251 (+)
Type: TF
Location: 40385 - 41251 (+)
Gene ID: k141_64463_30
Type: CAZyme
Location: 41352 - 42830 (+)
Type: CAZyme
Location: 41352 - 42830 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas mossii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.