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Cluster: CGMR021028_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_56423 k141_56423_2 1860 5372 - 1.B.14.6.1
pfam k141_56423 k141_56423_3 5666 7159 - GHL10
pfam k141_56423 k141_56423_4 7168 9027 - Metallophos | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4
CAZyme k141_56423 k141_56423_5 9564 10727 + GH171
TC k141_56423 k141_56423_6 10740 12218 + 2.A.21.3.7
CAZyme k141_56423 k141_56423_7 12229 13686 + GT2
pfam k141_56423 k141_56423_8 13772 14725 + DUF4922 | Ap4A_phos_N
pfam k141_56423 k141_56423_9 14710 16005 + SpoIID
TC k141_56423 k141_56423_10 16031 17893 + 2.A.1.25.5
CAZyme k141_56423 k141_56423_11 17916 19151 + GH171
Gene ID: k141_56423_2
Type: TC
Location: 1860 - 5372 (-)
Gene ID: k141_56423_3
Type: pfam
Location: 5666 - 7159 (-)
Gene ID: k141_56423_4
Type: pfam
Location: 7168 - 9027 (-)
Gene ID: k141_56423_5
Type: CAZyme
Location: 9564 - 10727 (+)
Gene ID: k141_56423_6
Type: TC
Location: 10740 - 12218 (+)
Gene ID: k141_56423_7
Type: CAZyme
Location: 12229 - 13686 (+)
Gene ID: k141_56423_8
Type: pfam
Location: 13772 - 14725 (+)
Gene ID: k141_56423_9
Type: pfam
Location: 14710 - 16005 (+)
Gene ID: k141_56423_10
Type: TC
Location: 16031 - 17893 (+)
Gene ID: k141_56423_11
Type: CAZyme
Location: 17916 - 19151 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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