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Cluster: CGMR021028_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_101730 k141_101730_10 4788 6689 + 1.B.14.1.13
pfam k141_101730 k141_101730_11 6719 7657 + DUF362
pfam k141_101730 k141_101730_12 7679 9223 + Fer4_5 | Fer4_5 | Fer4_7 | Fer4_8
CAZyme k141_101730 k141_101730_13 9463 12129 + CBM20 | GH77
CAZyme k141_101730 k141_101730_14 12152 13996 + GH13_46
TF k141_101730 k141_101730_15 14033 15058 + LacI
TC k141_101730 k141_101730_16 15093 16430 + 2.A.2.6.3
CAZyme k141_101730 k141_101730_17 16466 17836 + GH13
pfam k141_101730 k141_101730_18 18081 18953 - GldN
TC k141_101730 k141_101730_19 18975 20543 - 9.A.25.1.1
pfam k141_101730 k141_101730_20 20597 21484 - GldL_N
TC k141_101730 k141_101730_21 21511 23673 - 9.A.25.1.1
Gene ID: k141_101730_10
Type: TC
Location: 4788 - 6689 (+)
Gene ID: k141_101730_11
Type: pfam
Location: 6719 - 7657 (+)
Gene ID: k141_101730_12
Type: pfam
Location: 7679 - 9223 (+)
Gene ID: k141_101730_13
Type: CAZyme
Location: 9463 - 12129 (+)
Gene ID: k141_101730_14
Type: CAZyme
Location: 12152 - 13996 (+)
Gene ID: k141_101730_15
Type: TF
Location: 14033 - 15058 (+)
Gene ID: k141_101730_16
Type: TC
Location: 15093 - 16430 (+)
Gene ID: k141_101730_17
Type: CAZyme
Location: 16466 - 17836 (+)
Gene ID: k141_101730_18
Type: pfam
Location: 18081 - 18953 (-)
Gene ID: k141_101730_19
Type: TC
Location: 18975 - 20543 (-)
Gene ID: k141_101730_20
Type: pfam
Location: 20597 - 21484 (-)
Gene ID: k141_101730_21
Type: TC
Location: 21511 - 23673 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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