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Cluster: CGMR021028_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_126113 k141_126113_3 3527 6625 + GH2
TF k141_126113 k141_126113_4 6866 9697 + GerE
TC k141_126113 k141_126113_5 9961 13023 + 1.B.14.6.1
pfam k141_126113 k141_126113_6 13048 14508 + SusD_RagB | SusD-like_3
CAZyme k141_126113 k141_126113_7 14622 16790 + GH144
CAZyme k141_126113 k141_126113_8 16798 19035 + GH3
CAZyme k141_126113 k141_126113_9 19040 21322 + GH3
CAZyme k141_126113 k141_126113_10 21331 22677 + GH144
CAZyme k141_126113 k141_126113_11 22694 24445 + CBM32 | GH43_28
TC k141_126113 k141_126113_12 24569 25969 - 2.A.1.1.55
Gene ID: k141_126113_3
Type: CAZyme
Location: 3527 - 6625 (+)
Gene ID: k141_126113_4
Type: TF
Location: 6866 - 9697 (+)
Gene ID: k141_126113_5
Type: TC
Location: 9961 - 13023 (+)
Gene ID: k141_126113_6
Type: pfam
Location: 13048 - 14508 (+)
Gene ID: k141_126113_7
Type: CAZyme
Location: 14622 - 16790 (+)
Gene ID: k141_126113_8
Type: CAZyme
Location: 16798 - 19035 (+)
Gene ID: k141_126113_9
Type: CAZyme
Location: 19040 - 21322 (+)
Gene ID: k141_126113_10
Type: CAZyme
Location: 21331 - 22677 (+)
Gene ID: k141_126113_11
Type: CAZyme
Location: 22694 - 24445 (+)
Gene ID: k141_126113_12
Type: TC
Location: 24569 - 25969 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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