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Cluster: CGMR020543_CGC95

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_19579 k141_19579_12 12509 14347 + 9.B.33.1.1
CAZyme k141_19579 k141_19579_13 14386 16989 - GH38
CAZyme k141_19579 k141_19579_14 17047 19260 - GH95
TF k141_19579 k141_19579_15 19290 21578 - HTH_AraC
CAZyme k141_19579 k141_19579_16 21613 24753 - GH38
TC k141_19579 k141_19579_17 24764 26467 - 3.A.1.1.10
TC k141_19579 k141_19579_18 26529 27482 - 3.A.1.1.29
TC k141_19579 k141_19579_19 27497 28417 - 3.A.1.1.10
pfam k141_19579 k141_19579_20 28560 31163 - Glyco_hydro_38N
TC k141_19579 k141_19579_21 31505 33385 - 3.A.1.135.5
TC k141_19579 k141_19579_22 33375 35120 - 3.A.1.135.5
Gene ID: k141_19579_12
Type: TC
Location: 12509 - 14347 (+)
Gene ID: k141_19579_13
Type: CAZyme
Location: 14386 - 16989 (-)
Gene ID: k141_19579_14
Type: CAZyme
Location: 17047 - 19260 (-)
Gene ID: k141_19579_15
Type: TF
Location: 19290 - 21578 (-)
Gene ID: k141_19579_16
Type: CAZyme
Location: 21613 - 24753 (-)
Gene ID: k141_19579_17
Type: TC
Location: 24764 - 26467 (-)
Gene ID: k141_19579_18
Type: TC
Location: 26529 - 27482 (-)
Gene ID: k141_19579_19
Type: TC
Location: 27497 - 28417 (-)
Gene ID: k141_19579_20
Type: pfam
Location: 28560 - 31163 (-)
Gene ID: k141_19579_21
Type: TC
Location: 31505 - 33385 (-)
Gene ID: k141_19579_22
Type: TC
Location: 33375 - 35120 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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