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Cluster: CGMR020543_CGC89

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_3328 k141_3328_1 3 4949 + CBM51 | GH98
CAZyme k141_3328 k141_3328_2 5227 13227 + CBM51
STP k141_3328 k141_3328_3 13479 14933 + SBP_bac_1
TC k141_3328 k141_3328_4 15026 15937 + 3.A.1.1.47
TC k141_3328 k141_3328_5 15953 16795 + 3.A.1.1.47
CAZyme k141_3328 k141_3328_6 16805 18118 + GH29
pfam k141_3328 k141_3328_7 18139 19059 + BcrAD_BadFG
STP k141_3328 k141_3328_8 19075 20115 + SIS | SIS
CAZyme k141_3328 k141_3328_9 20134 21444 + GH4
Gene ID: k141_3328_1
Type: CAZyme
Location: 3 - 4949 (+)
Gene ID: k141_3328_2
Type: CAZyme
Location: 5227 - 13227 (+)
Gene ID: k141_3328_3
Type: STP
Location: 13479 - 14933 (+)
Gene ID: k141_3328_4
Type: TC
Location: 15026 - 15937 (+)
Gene ID: k141_3328_5
Type: TC
Location: 15953 - 16795 (+)
Gene ID: k141_3328_6
Type: CAZyme
Location: 16805 - 18118 (+)
Gene ID: k141_3328_7
Type: pfam
Location: 18139 - 19059 (+)
Gene ID: k141_3328_8
Type: STP
Location: 19075 - 20115 (+)
Gene ID: k141_3328_9
Type: CAZyme
Location: 20134 - 21444 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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