Cluster: CGMR020543_CGC84
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_08321
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_18736 | k141_18736_1 | 2 | 8041 | + | CBM40 | GH33 | GH33 |
| TC | k141_18736 | k141_18736_2 | 8304 | 9155 | + | 2.A.119.2.1 |
| pfam | k141_18736 | k141_18736_3 | 9230 | 9931 | + | Lactamase_B_3 |
| TF | k141_18736 | k141_18736_4 | 10069 | 11088 | + | LacI |
| CAZyme | k141_18736 | k141_18736_5 | 11359 | 13020 | + | GH13_31 |
Gene ID: k141_18736_1
Type: CAZyme
Location: 2 - 8041 (+)
Type: CAZyme
Location: 2 - 8041 (+)
Gene ID: k141_18736_2
Type: TC
Location: 8304 - 9155 (+)
Type: TC
Location: 8304 - 9155 (+)
Gene ID: k141_18736_3
Type: pfam
Location: 9230 - 9931 (+)
Type: pfam
Location: 9230 - 9931 (+)
Gene ID: k141_18736_4
Type: TF
Location: 10069 - 11088 (+)
Type: TF
Location: 10069 - 11088 (+)
Gene ID: k141_18736_5
Type: CAZyme
Location: 11359 - 13020 (+)
Type: CAZyme
Location: 11359 - 13020 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.