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Cluster: CGMR020543_CGC81

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_30289 k141_30289_20 23132 24346 + 3.A.1.4.10
NULL(UNKNOWN) k141_30289 k141_30289_21 24359 24658 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_30289 k141_30289_22 24719 25606 + 3.A.1.4.10
TC k141_30289 k141_30289_23 25615 26586 + 3.A.1.4.8
TC k141_30289 k141_30289_24 26589 27347 + 3.A.1.4.10
TC k141_30289 k141_30289_25 27361 28071 + 3.A.1.4.10
TC k141_30289 k141_30289_26 28154 28792 + 2.A.115.2.14
TF k141_30289 k141_30289_27 28885 29346 - MarR
STP k141_30289 k141_30289_28 29348 30706 - Citrate_synt
CAZyme k141_30289 k141_30289_29 31061 33256 + GH36
TC k141_30289 k141_30289_30 33339 33983 - 9.B.28.1.3
TC k141_30289 k141_30289_31 34693 36045 + 3.A.1.1.44
TC k141_30289 k141_30289_32 36159 37055 + 3.A.1.1.20
TC k141_30289 k141_30289_33 37070 37900 + 3.A.1.1.36
TF k141_30289 k141_30289_34 37964 38875 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_30289 k141_30289_35 39329 39559 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_30289 k141_30289_36 39729 41051 - GH4
Gene ID: k141_30289_20
Type: TC
Location: 23132 - 24346 (+)
Gene ID: k141_30289_21
Type:
Location: 24359 - 24658 (+)
Gene ID: k141_30289_22
Type: TC
Location: 24719 - 25606 (+)
Gene ID: k141_30289_23
Type: TC
Location: 25615 - 26586 (+)
Gene ID: k141_30289_24
Type: TC
Location: 26589 - 27347 (+)
Gene ID: k141_30289_25
Type: TC
Location: 27361 - 28071 (+)
Gene ID: k141_30289_26
Type: TC
Location: 28154 - 28792 (+)
Gene ID: k141_30289_27
Type: TF
Location: 28885 - 29346 (-)
Gene ID: k141_30289_28
Type: STP
Location: 29348 - 30706 (-)
Gene ID: k141_30289_29
Type: CAZyme
Location: 31061 - 33256 (+)
Gene ID: k141_30289_30
Type: TC
Location: 33339 - 33983 (-)
Gene ID: k141_30289_31
Type: TC
Location: 34693 - 36045 (+)
Gene ID: k141_30289_32
Type: TC
Location: 36159 - 37055 (+)
Gene ID: k141_30289_33
Type: TC
Location: 37070 - 37900 (+)
Gene ID: k141_30289_34
Type: TF
Location: 37964 - 38875 (-)
Gene ID: k141_30289_35
Type:
Location: 39329 - 39559 (+)
Gene ID: k141_30289_36
Type: CAZyme
Location: 39729 - 41051 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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