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Cluster: CGMR020543_CGC79

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_22082 k141_22082_3 1023 3359 + GH78
CAZyme k141_22082 k141_22082_4 3465 6437 + CBM67 | GH78
CAZyme k141_22082 k141_22082_5 6516 7592 + GH43_24
pfam k141_22082 k141_22082_6 7692 9245 + Apiosidase | DUF5060 | DUF5605
STP k141_22082 k141_22082_7 9544 10914 + SBP_bac_1
TC k141_22082 k141_22082_8 10986 11846 + 3.A.1.1.7
TC k141_22082 k141_22082_9 11843 12670 + 3.A.1.1.45
TC k141_22082 k141_22082_10 12724 14394 + 9.B.33.1.1
TF k141_22082 k141_22082_11 14394 15848 + HTH_AraC
CAZyme k141_22082 k141_22082_12 15826 18177 + CBM67 | GH78
NULL(UNKNOWN) k141_22082 k141_22082_13 18720 19955 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_22082 k141_22082_14 20395 20691 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_22082 k141_22082_15 21463 22005 + 9.A.8.1.5
TC k141_22082 k141_22082_16 22196 23968 + 3.A.1.5.6
TC k141_22082 k141_22082_17 24036 25004 + 3.A.1.5.16
TC k141_22082 k141_22082_18 24988 25809 + 3.A.1.5.15
TC k141_22082 k141_22082_19 25811 26491 + 3.A.1.5.20
TC k141_22082 k141_22082_20 26488 27279 + 3.A.1.5.12
Gene ID: k141_22082_3
Type: CAZyme
Location: 1023 - 3359 (+)
Gene ID: k141_22082_4
Type: CAZyme
Location: 3465 - 6437 (+)
Gene ID: k141_22082_5
Type: CAZyme
Location: 6516 - 7592 (+)
Gene ID: k141_22082_6
Type: pfam
Location: 7692 - 9245 (+)
Gene ID: k141_22082_7
Type: STP
Location: 9544 - 10914 (+)
Gene ID: k141_22082_8
Type: TC
Location: 10986 - 11846 (+)
Gene ID: k141_22082_9
Type: TC
Location: 11843 - 12670 (+)
Gene ID: k141_22082_10
Type: TC
Location: 12724 - 14394 (+)
Gene ID: k141_22082_11
Type: TF
Location: 14394 - 15848 (+)
Gene ID: k141_22082_12
Type: CAZyme
Location: 15826 - 18177 (+)
Gene ID: k141_22082_13
Type:
Location: 18720 - 19955 (+)
Gene ID: k141_22082_14
Type:
Location: 20395 - 20691 (+)
Gene ID: k141_22082_15
Type: TC
Location: 21463 - 22005 (+)
Gene ID: k141_22082_16
Type: TC
Location: 22196 - 23968 (+)
Gene ID: k141_22082_17
Type: TC
Location: 24036 - 25004 (+)
Gene ID: k141_22082_18
Type: TC
Location: 24988 - 25809 (+)
Gene ID: k141_22082_19
Type: TC
Location: 25811 - 26491 (+)
Gene ID: k141_22082_20
Type: TC
Location: 26488 - 27279 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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