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Cluster: CGMR020543_CGC78

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_12611 k141_12611_2 1121 6037 + CBM35 | CBM66 | GH43_26 | GH43_31
pfam k141_12611 k141_12611_3 6116 6967 - YitT_membrane | DUF2179
TC k141_12611 k141_12611_4 7197 8963 + 8.A.59.2.1
TF k141_12611 k141_12611_5 8965 10557 + HTH_AraC | HTH_AraC
STP k141_12611 k141_12611_6 10746 12086 + SBP_bac_1
CAZyme k141_12611 k141_12611_7 12204 16922 + CBM32 | CBM32 | CBM32 | GH140
NULL(UNKNOWN) k141_12611 k141_12611_8 17178 17333 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_12611 k141_12611_9 17349 18227 + 3.A.1.1.7
TC k141_12611 k141_12611_10 18229 19056 + 3.A.1.1.47
Gene ID: k141_12611_2
Type: CAZyme
Location: 1121 - 6037 (+)
Gene ID: k141_12611_3
Type: pfam
Location: 6116 - 6967 (-)
Gene ID: k141_12611_4
Type: TC
Location: 7197 - 8963 (+)
Gene ID: k141_12611_5
Type: TF
Location: 8965 - 10557 (+)
Gene ID: k141_12611_6
Type: STP
Location: 10746 - 12086 (+)
Gene ID: k141_12611_7
Type: CAZyme
Location: 12204 - 16922 (+)
Gene ID: k141_12611_8
Type:
Location: 17178 - 17333 (+)
Gene ID: k141_12611_9
Type: TC
Location: 17349 - 18227 (+)
Gene ID: k141_12611_10
Type: TC
Location: 18229 - 19056 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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