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Cluster: CGMR020543_CGC73

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_9974 k141_9974_2 1817 2947 + GH88
CAZyme k141_9974 k141_9974_3 2961 4685 + GH154
NULL(UNKNOWN) k141_9974 k141_9974_4 4672 6018 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_9974 k141_9974_5 6050 7807 + PL33_2
NULL(UNKNOWN) k141_9974 k141_9974_6 7764 7874 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_9974 k141_9974_7 8074 9189 + 3.A.1.2.3
TC k141_9974 k141_9974_8 9269 10768 + 3.A.1.2.3
TC k141_9974 k141_9974_9 10823 12052 + 3.A.1.2.3
TF k141_9974 k141_9974_10 12054 12914 - HTH_AraC | HTH_AraC
CAZyme k141_9974 k141_9974_11 13047 16232 + GH106
Gene ID: k141_9974_2
Type: CAZyme
Location: 1817 - 2947 (+)
Gene ID: k141_9974_3
Type: CAZyme
Location: 2961 - 4685 (+)
Gene ID: k141_9974_4
Type:
Location: 4672 - 6018 (+)
Gene ID: k141_9974_5
Type: CAZyme
Location: 6050 - 7807 (+)
Gene ID: k141_9974_6
Type:
Location: 7764 - 7874 (+)
Gene ID: k141_9974_7
Type: TC
Location: 8074 - 9189 (+)
Gene ID: k141_9974_8
Type: TC
Location: 9269 - 10768 (+)
Gene ID: k141_9974_9
Type: TC
Location: 10823 - 12052 (+)
Gene ID: k141_9974_10
Type: TF
Location: 12054 - 12914 (-)
Gene ID: k141_9974_11
Type: CAZyme
Location: 13047 - 16232 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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