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Cluster: CGMR020543_CGC72

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_7344 k141_7344_3 1660 2592 + 2.A.7.3.29
CAZyme k141_7344 k141_7344_4 2770 4254 + GH77
TF k141_7344 k141_7344_5 4374 5405 + LacI
TC k141_7344 k141_7344_6 5681 6526 + 3.A.1.26.7
TC k141_7344 k141_7344_7 6523 7377 + 3.A.1.26.7
TC k141_7344 k141_7344_8 7496 8314 + 3.A.1.25.4
pfam k141_7344 k141_7344_9 8425 9171 + PseudoU_synth_1 | PseudoU_synth_1
NULL(UNKNOWN) k141_7344 k141_7344_10 9467 9646 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_7344 k141_7344_11 9788 10780 + 3.A.7.13.2
Gene ID: k141_7344_3
Type: TC
Location: 1660 - 2592 (+)
Gene ID: k141_7344_4
Type: CAZyme
Location: 2770 - 4254 (+)
Gene ID: k141_7344_5
Type: TF
Location: 4374 - 5405 (+)
Gene ID: k141_7344_6
Type: TC
Location: 5681 - 6526 (+)
Gene ID: k141_7344_7
Type: TC
Location: 6523 - 7377 (+)
Gene ID: k141_7344_8
Type: TC
Location: 7496 - 8314 (+)
Gene ID: k141_7344_9
Type: pfam
Location: 8425 - 9171 (+)
Gene ID: k141_7344_10
Type:
Location: 9467 - 9646 (+)
Gene ID: k141_7344_11
Type: TC
Location: 9788 - 10780 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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