Cluster: CGMR020543_CGC69
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR020543
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5578 | k141_5578_103 | 127231 | 127950 | - | 3.A.11.1.4 |
| TC | k141_5578 | k141_5578_104 | 128009 | 130246 | - | 3.A.7.16.1 |
| TC | k141_5578 | k141_5578_105 | 130539 | 131528 | - | 1.A.33.1.5 |
| CAZyme | k141_5578 | k141_5578_106 | 131812 | 134952 | - | GH106 |
| TF | k141_5578 | k141_5578_107 | 134957 | 136459 | - | HTH_AraC | HTH_AraC |
| TC | k141_5578 | k141_5578_108 | 136515 | 138305 | - | 9.B.33.1.1 |
| TC | k141_5578 | k141_5578_109 | 138430 | 139260 | - | 3.A.1.1.41 |
| TC | k141_5578 | k141_5578_110 | 139263 | 140120 | - | 3.A.1.1.7 |
| STP | k141_5578 | k141_5578_111 | 140288 | 141724 | - | SBP_bac_1 |
| CAZyme | k141_5578 | k141_5578_112 | 141852 | 143639 | - | GH2 |
| TC | k141_5578 | k141_5578_113 | 143766 | 144590 | - | 3.A.1.1.36 |
| TC | k141_5578 | k141_5578_114 | 144587 | 145483 | - | 3.A.1.1.36 |
| TC | k141_5578 | k141_5578_115 | 145519 | 146943 | - | 3.A.1.1.36 |
| TF | k141_5578 | k141_5578_116 | 147371 | 148291 | - | HTH_5 |
| CAZyme | k141_5578 | k141_5578_117 | 148434 | 151079 | - | CBM67 | GH78 |
Gene ID: k141_5578_103
Type: TC
Location: 127231 - 127950 (-)
Type: TC
Location: 127231 - 127950 (-)
Gene ID: k141_5578_104
Type: TC
Location: 128009 - 130246 (-)
Type: TC
Location: 128009 - 130246 (-)
Gene ID: k141_5578_105
Type: TC
Location: 130539 - 131528 (-)
Type: TC
Location: 130539 - 131528 (-)
Gene ID: k141_5578_106
Type: CAZyme
Location: 131812 - 134952 (-)
Type: CAZyme
Location: 131812 - 134952 (-)
Gene ID: k141_5578_107
Type: TF
Location: 134957 - 136459 (-)
Type: TF
Location: 134957 - 136459 (-)
Gene ID: k141_5578_108
Type: TC
Location: 136515 - 138305 (-)
Type: TC
Location: 136515 - 138305 (-)
Gene ID: k141_5578_109
Type: TC
Location: 138430 - 139260 (-)
Type: TC
Location: 138430 - 139260 (-)
Gene ID: k141_5578_110
Type: TC
Location: 139263 - 140120 (-)
Type: TC
Location: 139263 - 140120 (-)
Gene ID: k141_5578_111
Type: STP
Location: 140288 - 141724 (-)
Type: STP
Location: 140288 - 141724 (-)
Gene ID: k141_5578_112
Type: CAZyme
Location: 141852 - 143639 (-)
Type: CAZyme
Location: 141852 - 143639 (-)
Gene ID: k141_5578_113
Type: TC
Location: 143766 - 144590 (-)
Type: TC
Location: 143766 - 144590 (-)
Gene ID: k141_5578_114
Type: TC
Location: 144587 - 145483 (-)
Type: TC
Location: 144587 - 145483 (-)
Gene ID: k141_5578_115
Type: TC
Location: 145519 - 146943 (-)
Type: TC
Location: 145519 - 146943 (-)
Gene ID: k141_5578_116
Type: TF
Location: 147371 - 148291 (-)
Type: TF
Location: 147371 - 148291 (-)
Gene ID: k141_5578_117
Type: CAZyme
Location: 148434 - 151079 (-)
Type: CAZyme
Location: 148434 - 151079 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.