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Cluster: CGMR020543_CGC66

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_5578 k141_5578_28 25550 26488 - GT2
pfam k141_5578 k141_5578_29 26493 27920 - LytR_cpsA_psr
TC k141_5578 k141_5578_30 27946 29346 - 9.B.18.1.1
CAZyme k141_5578 k141_5578_31 29447 30409 - GT2
CAZyme k141_5578 k141_5578_32 30503 32533 - GT2
STP k141_5578 k141_5578_33 32487 33671 - Aminotran_1_2
pfam k141_5578 k141_5578_34 33676 36414 - YfhO
CAZyme k141_5578 k141_5578_35 36446 38890 - GT2 | GT2
CAZyme k141_5578 k141_5578_36 38928 41972 - GT2 | GT2
pfam k141_5578 k141_5578_37 42048 42968 - RrnaAD | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC k141_5578 k141_5578_38 43052 44347 - 3.A.1.103.6
TC k141_5578 k141_5578_39 44363 45169 - 3.A.1.104.1
Gene ID: k141_5578_28
Type: CAZyme
Location: 25550 - 26488 (-)
Gene ID: k141_5578_29
Type: pfam
Location: 26493 - 27920 (-)
Gene ID: k141_5578_30
Type: TC
Location: 27946 - 29346 (-)
Gene ID: k141_5578_31
Type: CAZyme
Location: 29447 - 30409 (-)
Gene ID: k141_5578_32
Type: CAZyme
Location: 30503 - 32533 (-)
Gene ID: k141_5578_33
Type: STP
Location: 32487 - 33671 (-)
Gene ID: k141_5578_34
Type: pfam
Location: 33676 - 36414 (-)
Gene ID: k141_5578_35
Type: CAZyme
Location: 36446 - 38890 (-)
Gene ID: k141_5578_36
Type: CAZyme
Location: 38928 - 41972 (-)
Gene ID: k141_5578_37
Type: pfam
Location: 42048 - 42968 (-)
Gene ID: k141_5578_38
Type: TC
Location: 43052 - 44347 (-)
Gene ID: k141_5578_39
Type: TC
Location: 44363 - 45169 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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