Cluster: CGMR020543_CGC65
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_08347
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5578 | k141_5578_12 | 8594 | 9778 | - | 3.D.10.1.4 |
| pfam | k141_5578 | k141_5578_13 | 9797 | 10705 | - | NadA |
| TF | k141_5578 | k141_5578_14 | 10919 | 11299 | + | GntR |
| TC | k141_5578 | k141_5578_15 | 11296 | 12168 | + | 3.A.1.105.7 |
| NULL(UNKNOWN) | k141_5578 | k141_5578_16 | 12168 | 12818 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | k141_5578 | k141_5578_17 | 12899 | 13849 | - | S09.B04 |
| CAZyme | k141_5578 | k141_5578_18 | 13846 | 14943 | - | GT2 |
| TC | k141_5578 | k141_5578_19 | 15093 | 15437 | - | 2.A.7.33.5 |
Gene ID: k141_5578_12
Type: TC
Location: 8594 - 9778 (-)
Type: TC
Location: 8594 - 9778 (-)
Gene ID: k141_5578_13
Type: pfam
Location: 9797 - 10705 (-)
Type: pfam
Location: 9797 - 10705 (-)
Gene ID: k141_5578_14
Type: TF
Location: 10919 - 11299 (+)
Type: TF
Location: 10919 - 11299 (+)
Gene ID: k141_5578_15
Type: TC
Location: 11296 - 12168 (+)
Type: TC
Location: 11296 - 12168 (+)
Gene ID: k141_5578_16
Type:
Location: 12168 - 12818 (+)
Type:
Location: 12168 - 12818 (+)
Gene ID: k141_5578_17
Type: peptidase
Location: 12899 - 13849 (-)
Type: peptidase
Location: 12899 - 13849 (-)
Gene ID: k141_5578_18
Type: CAZyme
Location: 13846 - 14943 (-)
Type: CAZyme
Location: 13846 - 14943 (-)
Gene ID: k141_5578_19
Type: TC
Location: 15093 - 15437 (-)
Type: TC
Location: 15093 - 15437 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.