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Cluster: CGMR020543_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_27808 k141_27808_27 43782 44549 + 3.A.1.134.12
TC k141_27808 k141_27808_28 44539 46557 + 3.A.1.134.12
pfam k141_27808 k141_27808_29 46740 47234 - DUF2798
TC k141_27808 k141_27808_30 47408 48739 - 2.A.66.1.28
TF k141_27808 k141_27808_31 48816 49631 - MerR
pfam k141_27808 k141_27808_32 49974 50819 + PRD | PRD | CAT_RBD
TC k141_27808 k141_27808_33 50907 52901 + 4.A.1.2.6
CAZyme k141_27808 k141_27808_34 52913 54364 + GH1
STP k141_27808 k141_27808_35 54351 54608 + PTS-HPr
TC k141_27808 k141_27808_36 54712 56334 + 8.A.7.1.1
Gene ID: k141_27808_27
Type: TC
Location: 43782 - 44549 (+)
Gene ID: k141_27808_28
Type: TC
Location: 44539 - 46557 (+)
Gene ID: k141_27808_29
Type: pfam
Location: 46740 - 47234 (-)
Gene ID: k141_27808_30
Type: TC
Location: 47408 - 48739 (-)
Gene ID: k141_27808_31
Type: TF
Location: 48816 - 49631 (-)
Gene ID: k141_27808_32
Type: pfam
Location: 49974 - 50819 (+)
Gene ID: k141_27808_33
Type: TC
Location: 50907 - 52901 (+)
Gene ID: k141_27808_34
Type: CAZyme
Location: 52913 - 54364 (+)
Gene ID: k141_27808_35
Type: STP
Location: 54351 - 54608 (+)
Gene ID: k141_27808_36
Type: TC
Location: 54712 - 56334 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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