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Cluster: CGMR020543_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_12301 k141_12301_1 3 5207 + GH43_26
TF k141_12301 k141_12301_2 5420 6625 + HTH_AraC | HTH_AraC
TC k141_12301 k141_12301_3 6795 7892 + 3.A.1.2.14
TC k141_12301 k141_12301_4 7992 9521 + 3.A.1.2.14
TC k141_12301 k141_12301_5 9505 10536 + 3.A.1.2.14
TC k141_12301 k141_12301_6 10533 11513 + 3.A.1.2.14
TC k141_12301 k141_12301_7 11607 13412 + 8.A.59.2.1
TC k141_12301 k141_12301_8 13402 15270 + 3.A.1.2.14
Gene ID: k141_12301_1
Type: CAZyme
Location: 3 - 5207 (+)
Gene ID: k141_12301_2
Type: TF
Location: 5420 - 6625 (+)
Gene ID: k141_12301_3
Type: TC
Location: 6795 - 7892 (+)
Gene ID: k141_12301_4
Type: TC
Location: 7992 - 9521 (+)
Gene ID: k141_12301_5
Type: TC
Location: 9505 - 10536 (+)
Gene ID: k141_12301_6
Type: TC
Location: 10533 - 11513 (+)
Gene ID: k141_12301_7
Type: TC
Location: 11607 - 13412 (+)
Gene ID: k141_12301_8
Type: TC
Location: 13402 - 15270 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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