Cluster: CGMR020543_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_02100
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_27808 | k141_27808_10 | 19478 | 21265 | + | 3.A.1.135.7 |
| TF | k141_27808 | k141_27808_11 | 21545 | 22432 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_27808 | k141_27808_12 | 22586 | 25393 | + | GH3 |
| CAZyme | k141_27808 | k141_27808_13 | 25596 | 27971 | + | GH129 |
| pfam | k141_27808 | k141_27808_14 | 28195 | 28884 | + | AlkZ-rel |
| TC | k141_27808 | k141_27808_15 | 28976 | 30808 | - | 3.A.1.135.9 |
| TC | k141_27808 | k141_27808_16 | 30805 | 32541 | - | 3.A.1.135.9 |
Gene ID: k141_27808_10
Type: TC
Location: 19478 - 21265 (+)
Type: TC
Location: 19478 - 21265 (+)
Gene ID: k141_27808_11
Type: TF
Location: 21545 - 22432 (-)
Type: TF
Location: 21545 - 22432 (-)
Gene ID: k141_27808_12
Type: CAZyme
Location: 22586 - 25393 (+)
Type: CAZyme
Location: 22586 - 25393 (+)
Gene ID: k141_27808_13
Type: CAZyme
Location: 25596 - 27971 (+)
Type: CAZyme
Location: 25596 - 27971 (+)
Gene ID: k141_27808_14
Type: pfam
Location: 28195 - 28884 (+)
Type: pfam
Location: 28195 - 28884 (+)
Gene ID: k141_27808_15
Type: TC
Location: 28976 - 30808 (-)
Type: TC
Location: 28976 - 30808 (-)
Gene ID: k141_27808_16
Type: TC
Location: 30805 - 32541 (-)
Type: TC
Location: 30805 - 32541 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.