Cluster: CGMR020543_CGC46
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_01399
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_11198 | k141_11198_9 | 11908 | 14598 | - | GH38 |
| TF | k141_11198 | k141_11198_10 | 15067 | 16185 | + | GntR |
| NULL(UNKNOWN) | k141_11198 | k141_11198_11 | 16228 | 17610 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_11198 | k141_11198_12 | 17607 | 18440 | + | 3.A.1.1.11 |
| STP | k141_11198 | k141_11198_13 | 18487 | 19857 | + | SBP_bac_1 |
| TC | k141_11198 | k141_11198_14 | 19890 | 20813 | + | 3.A.1.1.11 |
| CAZyme | k141_11198 | k141_11198_15 | 20839 | 24036 | + | GH106 |
Gene ID: k141_11198_9
Type: CAZyme
Location: 11908 - 14598 (-)
Type: CAZyme
Location: 11908 - 14598 (-)
Gene ID: k141_11198_10
Type: TF
Location: 15067 - 16185 (+)
Type: TF
Location: 15067 - 16185 (+)
Gene ID: k141_11198_11
Type:
Location: 16228 - 17610 (+)
Type:
Location: 16228 - 17610 (+)
Gene ID: k141_11198_12
Type: TC
Location: 17607 - 18440 (+)
Type: TC
Location: 17607 - 18440 (+)
Gene ID: k141_11198_13
Type: STP
Location: 18487 - 19857 (+)
Type: STP
Location: 18487 - 19857 (+)
Gene ID: k141_11198_14
Type: TC
Location: 19890 - 20813 (+)
Type: TC
Location: 19890 - 20813 (+)
Gene ID: k141_11198_15
Type: CAZyme
Location: 20839 - 24036 (+)
Type: CAZyme
Location: 20839 - 24036 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.