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Cluster: CGMR020543_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_18231 k141_18231_64 71901 77351 + CBM51 | GH2
pfam k141_18231 k141_18231_65 77663 78499 + PRD | PRD | CAT_RBD
TC k141_18231 k141_18231_66 78653 80830 + 4.A.1.1.14
TC k141_18231 k141_18231_67 80935 81192 + 8.A.8.1.1
pfam k141_18231 k141_18231_68 81336 81833 + HbpS-like
pfam k141_18231 k141_18231_69 81861 82748 - PseudoU_synth_2
TC k141_18231 k141_18231_70 83019 84386 + 2.A.22.5.3
pfam k141_18231 k141_18231_71 84472 84978 - Flavin_Reduct
TC k141_18231 k141_18231_72 84991 86862 - 3.A.1.11.7
TC k141_18231 k141_18231_73 86862 87677 - 3.A.1.11.8
TC k141_18231 k141_18231_74 87667 88740 - 3.A.1.11.8
Gene ID: k141_18231_64
Type: CAZyme
Location: 71901 - 77351 (+)
Gene ID: k141_18231_65
Type: pfam
Location: 77663 - 78499 (+)
Gene ID: k141_18231_66
Type: TC
Location: 78653 - 80830 (+)
Gene ID: k141_18231_67
Type: TC
Location: 80935 - 81192 (+)
Gene ID: k141_18231_68
Type: pfam
Location: 81336 - 81833 (+)
Gene ID: k141_18231_69
Type: pfam
Location: 81861 - 82748 (-)
Gene ID: k141_18231_70
Type: TC
Location: 83019 - 84386 (+)
Gene ID: k141_18231_71
Type: pfam
Location: 84472 - 84978 (-)
Gene ID: k141_18231_72
Type: TC
Location: 84991 - 86862 (-)
Gene ID: k141_18231_73
Type: TC
Location: 86862 - 87677 (-)
Gene ID: k141_18231_74
Type: TC
Location: 87667 - 88740 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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