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Cluster: CGMR020543_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23832 k141_23832_16 16379 17215 - 3.A.1.1.41
TC k141_23832 k141_23832_17 17225 18097 - 3.A.1.1.19
STP k141_23832 k141_23832_18 18227 19564 - SBP_bac_1
CAZyme k141_23832 k141_23832_19 19901 23059 - GH106
TF k141_23832 k141_23832_20 23129 24616 - HTH_AraC
TC k141_23832 k141_23832_21 24637 26409 - 9.B.33.1.1
TC k141_23832 k141_23832_22 26545 27375 - 3.A.1.1.28
TC k141_23832 k141_23832_23 27377 28327 - 3.A.1.1.7
STP k141_23832 k141_23832_24 28693 30072 - SBP_bac_1
CAZyme k141_23832 k141_23832_25 30343 31437 - GH172
Gene ID: k141_23832_16
Type: TC
Location: 16379 - 17215 (-)
Gene ID: k141_23832_17
Type: TC
Location: 17225 - 18097 (-)
Gene ID: k141_23832_18
Type: STP
Location: 18227 - 19564 (-)
Gene ID: k141_23832_19
Type: CAZyme
Location: 19901 - 23059 (-)
Gene ID: k141_23832_20
Type: TF
Location: 23129 - 24616 (-)
Gene ID: k141_23832_21
Type: TC
Location: 24637 - 26409 (-)
Gene ID: k141_23832_22
Type: TC
Location: 26545 - 27375 (-)
Gene ID: k141_23832_23
Type: TC
Location: 27377 - 28327 (-)
Gene ID: k141_23832_24
Type: STP
Location: 28693 - 30072 (-)
Gene ID: k141_23832_25
Type: CAZyme
Location: 30343 - 31437 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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