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Cluster: CGMR020543_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1576 k141_1576_6 7997 15814 - GH136 | GH20
TC k141_1576 k141_1576_7 16259 18460 - 2.A.6.4.2
NULL(UNKNOWN) k141_1576 k141_1576_8 18523 18954 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_1576 k141_1576_9 19195 19641 + Cupin_1 | Cupin_2
CAZyme k141_1576 k141_1576_10 19768 21708 - GH127
TC k141_1576 k141_1576_11 21855 22688 - 3.A.1.1.41
TC k141_1576 k141_1576_12 22690 23595 - 3.A.1.1.19
STP k141_1576 k141_1576_13 23687 25048 - SBP_bac_1
TC k141_1576 k141_1576_14 25163 26329 - 3.A.1.1.2
TF k141_1576 k141_1576_15 26370 27881 - HTH_AraC
TC k141_1576 k141_1576_16 27862 29703 - 8.A.59.2.1
CAZyme k141_1576 k141_1576_17 29867 36859 - GH121
TC k141_1576 k141_1576_18 37513 38931 - 2.A.2.3.3
pfam k141_1576 k141_1576_19 38948 39853 - AP_endonuc_2
pfam k141_1576 k141_1576_20 39948 40781 - AP_endonuc_2
CAZyme k141_1576 k141_1576_21 40806 41810 - GH177
TF k141_1576 k141_1576_22 42139 43167 - LacI
TC k141_1576 k141_1576_23 43290 43967 - 2.A.115.2.10
TF k141_1576 k141_1576_24 44041 44457 - MarR
pfam k141_1576 k141_1576_25 44643 44909 - Ribosomal_S18
TC k141_1576 k141_1576_26 44976 45428 - 3.A.7.19.1
Gene ID: k141_1576_6
Type: CAZyme
Location: 7997 - 15814 (-)
Gene ID: k141_1576_7
Type: TC
Location: 16259 - 18460 (-)
Gene ID: k141_1576_8
Type:
Location: 18523 - 18954 (-)
Gene ID: k141_1576_9
Type: pfam
Location: 19195 - 19641 (+)
Gene ID: k141_1576_10
Type: CAZyme
Location: 19768 - 21708 (-)
Gene ID: k141_1576_11
Type: TC
Location: 21855 - 22688 (-)
Gene ID: k141_1576_12
Type: TC
Location: 22690 - 23595 (-)
Gene ID: k141_1576_13
Type: STP
Location: 23687 - 25048 (-)
Gene ID: k141_1576_14
Type: TC
Location: 25163 - 26329 (-)
Gene ID: k141_1576_15
Type: TF
Location: 26370 - 27881 (-)
Gene ID: k141_1576_16
Type: TC
Location: 27862 - 29703 (-)
Gene ID: k141_1576_17
Type: CAZyme
Location: 29867 - 36859 (-)
Gene ID: k141_1576_18
Type: TC
Location: 37513 - 38931 (-)
Gene ID: k141_1576_19
Type: pfam
Location: 38948 - 39853 (-)
Gene ID: k141_1576_20
Type: pfam
Location: 39948 - 40781 (-)
Gene ID: k141_1576_21
Type: CAZyme
Location: 40806 - 41810 (-)
Gene ID: k141_1576_22
Type: TF
Location: 42139 - 43167 (-)
Gene ID: k141_1576_23
Type: TC
Location: 43290 - 43967 (-)
Gene ID: k141_1576_24
Type: TF
Location: 44041 - 44457 (-)
Gene ID: k141_1576_25
Type: pfam
Location: 44643 - 44909 (-)
Gene ID: k141_1576_26
Type: TC
Location: 44976 - 45428 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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