Cluster: CGMR020543_CGC34
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_02772
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_31129 | k141_31129_21 | 19600 | 27285 | + | GH101 |
| TF | k141_31129 | k141_31129_22 | 27395 | 28330 | - | HTH_AraC |
| TC | k141_31129 | k141_31129_23 | 28586 | 30298 | + | 3.A.1.1.10 |
| TC | k141_31129 | k141_31129_24 | 30369 | 31310 | + | 3.A.1.1.10 |
| TC | k141_31129 | k141_31129_25 | 31326 | 32216 | + | 3.A.1.1.10 |
| CAZyme | k141_31129 | k141_31129_26 | 32233 | 33306 | + | CE19 |
| pfam | k141_31129 | k141_31129_27 | 33303 | 34442 | + | URO-D |
| CAZyme | k141_31129 | k141_31129_28 | 34473 | 35855 | + | GH4 |
Gene ID: k141_31129_21
Type: CAZyme
Location: 19600 - 27285 (+)
Type: CAZyme
Location: 19600 - 27285 (+)
Gene ID: k141_31129_22
Type: TF
Location: 27395 - 28330 (-)
Type: TF
Location: 27395 - 28330 (-)
Gene ID: k141_31129_23
Type: TC
Location: 28586 - 30298 (+)
Type: TC
Location: 28586 - 30298 (+)
Gene ID: k141_31129_24
Type: TC
Location: 30369 - 31310 (+)
Type: TC
Location: 30369 - 31310 (+)
Gene ID: k141_31129_25
Type: TC
Location: 31326 - 32216 (+)
Type: TC
Location: 31326 - 32216 (+)
Gene ID: k141_31129_26
Type: CAZyme
Location: 32233 - 33306 (+)
Type: CAZyme
Location: 32233 - 33306 (+)
Gene ID: k141_31129_27
Type: pfam
Location: 33303 - 34442 (+)
Type: pfam
Location: 33303 - 34442 (+)
Gene ID: k141_31129_28
Type: CAZyme
Location: 34473 - 35855 (+)
Type: CAZyme
Location: 34473 - 35855 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.