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Cluster: CGMR020543_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_5260 k141_5260_1 242 1012 - 3.A.1.105.13
TC k141_5260 k141_5260_2 1014 1853 - 3.A.1.105.1
STP k141_5260 k141_5260_3 1938 2588 - TetR_N
TC k141_5260 k141_5260_4 2928 4205 + 3.A.1.1.27
TC k141_5260 k141_5260_5 4320 5687 + 3.A.1.1.27
TC k141_5260 k141_5260_6 5684 6523 + 3.A.1.1.27
CAZyme k141_5260 k141_5260_7 6665 8335 + GH13_31
NULL(UNKNOWN) k141_5260 k141_5260_8 8479 8865 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_5260 k141_5260_9 9204 10592 + SBP_bac_1
TC k141_5260 k141_5260_10 10649 11530 + 3.A.1.1.20
TC k141_5260 k141_5260_11 11564 12400 + 3.A.1.1.47
TF k141_5260 k141_5260_12 12430 13263 + HTH_AraC | HTH_AraC
TC k141_5260 k141_5260_13 13340 15073 + 8.A.59.2.1
CAZyme k141_5260 k141_5260_14 15085 17145 + GH42
CAZyme k141_5260 k141_5260_15 17461 18879 + CBM40
Gene ID: k141_5260_1
Type: TC
Location: 242 - 1012 (-)
Gene ID: k141_5260_2
Type: TC
Location: 1014 - 1853 (-)
Gene ID: k141_5260_3
Type: STP
Location: 1938 - 2588 (-)
Gene ID: k141_5260_4
Type: TC
Location: 2928 - 4205 (+)
Gene ID: k141_5260_5
Type: TC
Location: 4320 - 5687 (+)
Gene ID: k141_5260_6
Type: TC
Location: 5684 - 6523 (+)
Gene ID: k141_5260_7
Type: CAZyme
Location: 6665 - 8335 (+)
Gene ID: k141_5260_8
Type:
Location: 8479 - 8865 (+)
Gene ID: k141_5260_9
Type: STP
Location: 9204 - 10592 (+)
Gene ID: k141_5260_10
Type: TC
Location: 10649 - 11530 (+)
Gene ID: k141_5260_11
Type: TC
Location: 11564 - 12400 (+)
Gene ID: k141_5260_12
Type: TF
Location: 12430 - 13263 (+)
Gene ID: k141_5260_13
Type: TC
Location: 13340 - 15073 (+)
Gene ID: k141_5260_14
Type: CAZyme
Location: 15085 - 17145 (+)
Gene ID: k141_5260_15
Type: CAZyme
Location: 17461 - 18879 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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