Cluster: CGMR020543_CGC32
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_03478
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_3467 | k141_3467_1 | 176 | 3325 | - | GH38 |
| CAZyme | k141_3467 | k141_3467_2 | 3447 | 5489 | - | GH151 |
| TC | k141_3467 | k141_3467_3 | 5524 | 6363 | - | 3.A.1.1.12 |
| TC | k141_3467 | k141_3467_4 | 6353 | 7255 | - | 3.A.1.1.7 |
| STP | k141_3467 | k141_3467_5 | 7270 | 8667 | - | SBP_bac_1 |
| NULL(UNKNOWN) | k141_3467 | k141_3467_6 | 9052 | 9447 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_3467 | k141_3467_7 | 9590 | 11293 | - | 9.B.33.1.1 |
Gene ID: k141_3467_1
Type: CAZyme
Location: 176 - 3325 (-)
Type: CAZyme
Location: 176 - 3325 (-)
Gene ID: k141_3467_2
Type: CAZyme
Location: 3447 - 5489 (-)
Type: CAZyme
Location: 3447 - 5489 (-)
Gene ID: k141_3467_3
Type: TC
Location: 5524 - 6363 (-)
Type: TC
Location: 5524 - 6363 (-)
Gene ID: k141_3467_4
Type: TC
Location: 6353 - 7255 (-)
Type: TC
Location: 6353 - 7255 (-)
Gene ID: k141_3467_5
Type: STP
Location: 7270 - 8667 (-)
Type: STP
Location: 7270 - 8667 (-)
Gene ID: k141_3467_6
Type:
Location: 9052 - 9447 (+)
Type:
Location: 9052 - 9447 (+)
Gene ID: k141_3467_7
Type: TC
Location: 9590 - 11293 (-)
Type: TC
Location: 9590 - 11293 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.