dbCAN Logo

Cluster: CGMR020543_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1494 k141_1494_32 42595 44346 + 8.A.59.2.1
TF k141_1494 k141_1494_33 44349 45857 + HTH_AraC | HTH_AraC
STP k141_1494 k141_1494_34 45950 47296 + SBP_bac_1
TC k141_1494 k141_1494_35 47348 48235 + 3.A.1.1.28
TC k141_1494 k141_1494_36 48232 49074 + 3.A.1.1.28
pfam k141_1494 k141_1494_37 49088 50080 + ADH_zinc_N | ADH_N
pfam k141_1494 k141_1494_38 50083 51189 + GFO_IDH_MocA | GFO_IDH_MocA_C3
CAZyme k141_1494 k141_1494_39 51192 53318 + GH151
TC k141_1494 k141_1494_40 53341 53982 + 9.B.28.1.2
NULL(UNKNOWN) k141_1494 k141_1494_41 53969 54121 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_1494 k141_1494_42 54121 55335 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_1494 k141_1494_43 55712 60238 + GH95
Gene ID: k141_1494_32
Type: TC
Location: 42595 - 44346 (+)
Gene ID: k141_1494_33
Type: TF
Location: 44349 - 45857 (+)
Gene ID: k141_1494_34
Type: STP
Location: 45950 - 47296 (+)
Gene ID: k141_1494_35
Type: TC
Location: 47348 - 48235 (+)
Gene ID: k141_1494_36
Type: TC
Location: 48232 - 49074 (+)
Gene ID: k141_1494_37
Type: pfam
Location: 49088 - 50080 (+)
Gene ID: k141_1494_38
Type: pfam
Location: 50083 - 51189 (+)
Gene ID: k141_1494_39
Type: CAZyme
Location: 51192 - 53318 (+)
Gene ID: k141_1494_40
Type: TC
Location: 53341 - 53982 (+)
Gene ID: k141_1494_41
Type:
Location: 53969 - 54121 (+)
Gene ID: k141_1494_42
Type:
Location: 54121 - 55335 (+)
Gene ID: k141_1494_43
Type: CAZyme
Location: 55712 - 60238 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List