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Cluster: CGMR020543_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1494 k141_1494_14 14671 15504 - 3.A.1.1.18
TC k141_1494 k141_1494_15 15516 16403 - 3.A.1.1.25
STP k141_1494 k141_1494_16 16530 17891 - SBP_bac_1
TF k141_1494 k141_1494_17 18009 19520 - HTH_AraC
TC k141_1494 k141_1494_18 19517 21256 - 8.A.59.2.1
CAZyme k141_1494 k141_1494_19 21400 27951 - GH95
TF k141_1494 k141_1494_20 28798 29232 + MarR
TC k141_1494 k141_1494_21 29251 30978 + 3.A.1.135.5
TC k141_1494 k141_1494_22 30978 32837 + 3.A.1.135.5
pfam k141_1494 k141_1494_23 33056 33409 + Hpt
TC k141_1494 k141_1494_24 33425 35554 + 8.A.59.4.1
NULL(UNKNOWN) k141_1494 k141_1494_25 35591 35737 - NULL(UNKNOWN)
[View Structural Homologs]
STP k141_1494 k141_1494_26 35860 36099 + FeoA
TC k141_1494 k141_1494_27 36112 38259 + 9.A.8.1.5
TC k141_1494 k141_1494_28 38542 39198 - 3.A.1.124.1
Gene ID: k141_1494_14
Type: TC
Location: 14671 - 15504 (-)
Gene ID: k141_1494_15
Type: TC
Location: 15516 - 16403 (-)
Gene ID: k141_1494_16
Type: STP
Location: 16530 - 17891 (-)
Gene ID: k141_1494_17
Type: TF
Location: 18009 - 19520 (-)
Gene ID: k141_1494_18
Type: TC
Location: 19517 - 21256 (-)
Gene ID: k141_1494_19
Type: CAZyme
Location: 21400 - 27951 (-)
Gene ID: k141_1494_20
Type: TF
Location: 28798 - 29232 (+)
Gene ID: k141_1494_21
Type: TC
Location: 29251 - 30978 (+)
Gene ID: k141_1494_22
Type: TC
Location: 30978 - 32837 (+)
Gene ID: k141_1494_23
Type: pfam
Location: 33056 - 33409 (+)
Gene ID: k141_1494_24
Type: TC
Location: 33425 - 35554 (+)
Gene ID: k141_1494_25
Type:
Location: 35591 - 35737 (-)
Gene ID: k141_1494_26
Type: STP
Location: 35860 - 36099 (+)
Gene ID: k141_1494_27
Type: TC
Location: 36112 - 38259 (+)
Gene ID: k141_1494_28
Type: TC
Location: 38542 - 39198 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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