Cluster: CGMR020543_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_00021
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13635 | k141_13635_27 | 29668 | 30630 | + | 8.A.5.1.6 |
| pfam | k141_13635 | k141_13635_28 | 30778 | 31266 | - | Isochorismatase |
| TF | k141_13635 | k141_13635_29 | 31397 | 32335 | + | HTH_11 |
| CAZyme | k141_13635 | k141_13635_30 | 33382 | 35313 | + | GH67 |
| TC | k141_13635 | k141_13635_31 | 35364 | 36335 | + | 3.A.1.1.10 |
| TC | k141_13635 | k141_13635_32 | 36350 | 37222 | + | 3.A.1.1.29 |
Gene ID: k141_13635_27
Type: TC
Location: 29668 - 30630 (+)
Type: TC
Location: 29668 - 30630 (+)
Gene ID: k141_13635_28
Type: pfam
Location: 30778 - 31266 (-)
Type: pfam
Location: 30778 - 31266 (-)
Gene ID: k141_13635_29
Type: TF
Location: 31397 - 32335 (+)
Type: TF
Location: 31397 - 32335 (+)
Gene ID: k141_13635_30
Type: CAZyme
Location: 33382 - 35313 (+)
Type: CAZyme
Location: 33382 - 35313 (+)
Gene ID: k141_13635_31
Type: TC
Location: 35364 - 36335 (+)
Type: TC
Location: 35364 - 36335 (+)
Gene ID: k141_13635_32
Type: TC
Location: 36350 - 37222 (+)
Type: TC
Location: 36350 - 37222 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.