dbCAN Logo

Cluster: CGMR020543_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23128 k141_23128_2 1570 3324 + 8.A.59.2.1
STP k141_23128 k141_23128_3 3434 4831 + SBP_bac_1
TC k141_23128 k141_23128_4 4895 5812 + 3.A.1.1.34
TC k141_23128 k141_23128_5 5809 6636 + 3.A.1.1.34
CAZyme k141_23128 k141_23128_6 6647 8935 + GH35
pfam k141_23128 k141_23128_7 9305 9865 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7
pfam k141_23128 k141_23128_8 10995 11948 + Transposase_31
TC k141_23128 k141_23128_9 12425 13306 + 2.A.4.7.9
TC k141_23128 k141_23128_10 13448 14797 - 2.A.66.1.28
TF k141_23128 k141_23128_11 15093 15767 + Trans_reg_C
STP k141_23128 k141_23128_12 15755 16948 + HATPase_c | HisKA
TC k141_23128 k141_23128_13 17014 17892 + 3.A.1.148.3
NULL(UNKNOWN) k141_23128 k141_23128_14 17892 19157 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_23128 k141_23128_15 19114 19731 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_23128 k141_23128_16 19991 22255 + 2.A.16.2.2
pfam k141_23128 k141_23128_17 22603 24081 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
TC k141_23128 k141_23128_18 24129 26351 + 3.A.11.3.1
Gene ID: k141_23128_2
Type: TC
Location: 1570 - 3324 (+)
Gene ID: k141_23128_3
Type: STP
Location: 3434 - 4831 (+)
Gene ID: k141_23128_4
Type: TC
Location: 4895 - 5812 (+)
Gene ID: k141_23128_5
Type: TC
Location: 5809 - 6636 (+)
Gene ID: k141_23128_6
Type: CAZyme
Location: 6647 - 8935 (+)
Gene ID: k141_23128_7
Type: pfam
Location: 9305 - 9865 (-)
Gene ID: k141_23128_8
Type: pfam
Location: 10995 - 11948 (+)
Gene ID: k141_23128_9
Type: TC
Location: 12425 - 13306 (+)
Gene ID: k141_23128_10
Type: TC
Location: 13448 - 14797 (-)
Gene ID: k141_23128_11
Type: TF
Location: 15093 - 15767 (+)
Gene ID: k141_23128_12
Type: STP
Location: 15755 - 16948 (+)
Gene ID: k141_23128_13
Type: TC
Location: 17014 - 17892 (+)
Gene ID: k141_23128_14
Type:
Location: 17892 - 19157 (+)
Gene ID: k141_23128_15
Type:
Location: 19114 - 19731 (+)
Gene ID: k141_23128_16
Type: TC
Location: 19991 - 22255 (+)
Gene ID: k141_23128_17
Type: pfam
Location: 22603 - 24081 (+)
Gene ID: k141_23128_18
Type: TC
Location: 24129 - 26351 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List