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Cluster: CGMR020543_CGC145

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9023 k141_9023_9 10279 11214 + 3.A.1.1.29
TC k141_9023 k141_9023_10 11226 12122 + 3.A.1.1.29
CAZyme k141_9023 k141_9023_11 12132 14837 + GH106
CAZyme k141_9023 k141_9023_12 14834 16186 + GH1
CAZyme k141_9023 k141_9023_13 16310 19435 + GH106
pfam k141_9023 k141_9023_14 19436 20230 - ABC2_membrane_2
pfam k141_9023 k141_9023_15 20293 21087 - ABC2_membrane_2 | ABC2_membrane_3 | ABC2_membrane_4 | ABC2_membrane_5
TC k141_9023 k141_9023_16 21101 21982 - 3.A.1.126.1
Gene ID: k141_9023_9
Type: TC
Location: 10279 - 11214 (+)
Gene ID: k141_9023_10
Type: TC
Location: 11226 - 12122 (+)
Gene ID: k141_9023_11
Type: CAZyme
Location: 12132 - 14837 (+)
Gene ID: k141_9023_12
Type: CAZyme
Location: 14834 - 16186 (+)
Gene ID: k141_9023_13
Type: CAZyme
Location: 16310 - 19435 (+)
Gene ID: k141_9023_14
Type: pfam
Location: 19436 - 20230 (-)
Gene ID: k141_9023_15
Type: pfam
Location: 20293 - 21087 (-)
Gene ID: k141_9023_16
Type: TC
Location: 21101 - 21982 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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